Indulge in these seriously delicious Morning Glory Muffins, a fantastic recipe that is not only incredibly kid-friendly but also brimming with hidden fruits and wholesome vegetables!

Wholesome & Delicious Morning Glory Muffins: Your Guide to a Healthy Breakfast Treat
Do you envision the perfect morning glory muffin? We certainly do! It’s a wonderfully dense yet incredibly moist muffin that you can savor with absolutely zero guilt alongside your morning coffee or tea. These muffins redefine healthy baking, proving that wholesome can also be utterly delicious.
Our Morning Glory Muffins are designed to be versatile – they’re ideal for a hearty breakfast, a satisfying mid-day snack, or even a wholesome dessert. They bring together a symphony of flavors and textures, making them a family favorite. Here’s why this particular Morning Glory Muffins recipe will become a staple in your kitchen:
- Effortless Preparation: You’ll only need one bowl to mix the batter for these fantastic muffins, making cleanup a breeze.
- Aromatic Spice Blend: Infused with a blend of classic spices, these muffins offer a warm, comforting flavor reminiscent of a cherished spice cake.
- Nutrient-Packed: Each muffin provides a healthy serving of hidden vegetables and fruits, making it an easy way to boost your daily intake.
- Naturally Sweetened: This recipe relies on natural sweetness from maple syrup, applesauce, and shredded carrots, reducing the need for excessive refined sugars.
- Kid-Friendly Goodness: Even the pickiest eaters will love these, unaware of the wholesome ingredients packed inside.
- Perfect Texture: Expect a muffin that is perfectly moist, tender, and robust enough to satisfy any craving.
Key Ingredients for Glorious Morning Glory Muffins
While the ingredient list for these Morning Glory Muffins might seem extensive, rest assured they are all simple, accessible components. Each ingredient plays a crucial role in achieving the desired flavor, texture, and nutritional profile. Let’s break down what makes these muffins so special:
- Shredded Apples: Any apple variety works beautifully here; we often opt for Gala apples. Shredded apples contribute significant moisture and a natural sweetness, enhancing the overall flavor and tenderness of the muffins. They also add a delightful subtle fruitiness.
- Shredded Carrots: Morning Glory Muffins wouldn’t be complete without shredded carrots! Like the apples, carrots add both natural sweetness and essential moisture. Plus, they’re excellent for subtly incorporating vegetables into a treat – a perfect secret weapon for parents!
- White Whole Wheat Flour: We prefer white whole wheat flour for its lighter texture compared to regular whole wheat flour, while still retaining the nutritional benefits of whole grains. You can substitute it with all-purpose flour for a lighter crumb or use a 50/50 mix of all-purpose and whole wheat flour.
- Coconut Sugar: A touch of coconut sugar adds a lovely caramel-like sweetness. Brown sugar is an excellent substitute if coconut sugar isn’t readily available.
- Unsweetened Shredded Coconut: A classic addition to Morning Glory Muffins, shredded coconut adds wonderful texture and a hint of tropical flavor, contributing to that satisfyingly chunky bite.
- Chopped Pecans: We incorporate chopped pecans for healthy fats, protein, and a delightful crunch. Feel free to substitute with any other chopped nuts like walnuts or almonds for similar benefits and a different flavor profile.
- Ground Cinnamon: This spice is non-negotiable! Cinnamon provides a comforting warmth and classic bakery aroma that ties all the flavors together.
- Raisins or Craisins: Dried fruit adds bursts of concentrated sweetness and a chewy texture. While raisins are traditional, dried cranberries (craisins), dried blueberries, or even chopped dried apricots would be delicious alternatives.
- Flax Seed (Ground or Whole): A spoonful of flax seeds, especially ground, significantly boosts the fiber and omega-3 content of these muffins, adding a healthy punch without altering the taste.
- Ground Nutmeg: Nutmeg introduces a sweet, slightly spicy kick that perfectly complements the other warm spices. If you’re out of nutmeg, a pinch of ground cloves can be a suitable, though stronger, alternative.
- Baking Soda: Essential for proper leavening, baking soda ensures your muffins rise beautifully and have a light, airy texture despite being dense.
- Fresh Orange Zest (Optional, for Topping): For an elevated flavor and bright aroma, a sprinkle of fresh orange zest on top of the baked muffins is highly recommended. It adds a vibrant, citrusy note that truly makes them shine.
- Rolled Oats (Optional, for Topping): A light sprinkling of rolled oats on top before baking adds a rustic visual appeal and a pleasant chewiness to the muffin crowns.
- Large Eggs: Eggs bind the ingredients, add structure, and contribute to the richness and moisture of the muffins. Always use large eggs for consistent results.
- Maple Syrup: Maple syrup naturally sweetens the muffins and imparts a wonderful, nuanced flavor that pairs perfectly with the spices and fruits.
- Applesauce: By using applesauce, we can reduce the amount of oil needed, making these muffins even healthier without sacrificing moisture.
- Orange Juice: A splash of orange juice brightens the overall flavor profile, adding a subtle tang that balances the sweetness.
- Vanilla Extract: Vanilla enhances all the other flavors, adding depth and a comforting aroma.
- Coconut Oil (Melted): While we use less oil, a small amount of coconut oil is vital for achieving that perfectly moist and tender crumb that dense muffins require. You can easily substitute it with another favorite baking oil like melted butter or vegetable oil.
Essential Tip: Don’t Forget to Remove Moisture!
For truly magnificent Morning Glory Muffins that are moist, not mushy, remember this crucial step: always squeeze out the excess moisture from your shredded carrots and apples. This prevents your batter from becoming too wet and ensures a perfect muffin texture every time.

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Get all 6 healthy muffin recipes HERE!
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- Apple Cinnamon Muffins: The comforting flavors of apple and cinnamon baked into a soft, tender muffin.
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- Chocolate Chip Pumpkin Muffins: Seasonal perfection with warm spices and melty chocolate chips.

Mastering the Art of Muffin Making: Your Step-by-Step Guide
Crafting these wholesome Morning Glory Muffins is a straightforward process, designed for ease and enjoyment. Follow these simple steps to bake a batch of perfectly moist and flavorful muffins:
- Prepare & Measure (10-15 minutes): Begin by gathering all your ingredients and measuring them out. This “mise en place” approach ensures a smooth baking experience. Take care to shred your apples and carrots, then press out any excess moisture using a paper towel. This step is critical for a perfectly moist (not soggy!) muffin. Preheat your oven to 350°F (175°C) and line a 12-cup muffin tin with paper liners, spraying them lightly with cooking spray for easy release. If making 18 muffins, prepare a second tin.
- Combine Dry Ingredients (5 minutes): In a large mixing bowl, combine the white whole wheat flour, coconut sugar, shredded coconut, chopped pecans, ground cinnamon, raisins, flax seed, ground nutmeg, and baking soda. Whisk these dry ingredients together thoroughly to ensure even distribution.
- Mix Wet Ingredients (5 minutes): In a separate, even larger bowl, crack and whisk the two large eggs until lightly beaten. Then, add the maple syrup, applesauce, orange juice, and vanilla extract. Mix these wet ingredients until well combined and smooth.
- Combine Wet and Dry (2 minutes): Gently pour the dry ingredient mixture into the wet ingredient mixture. Using a spatula, fold the ingredients together until just combined. Be careful not to overmix, as this can lead to tough muffins. A few lumps are perfectly fine!
- Add Coconut Oil (1 minute): Finally, stir in the melted coconut oil until it’s just incorporated into the batter. This adds essential moisture and richness.
- Fill Muffin Cups (5 minutes): Using a cookie scoop or a 1/4-cup measuring cup, fill each prepared muffin liner about 3/4 of the way full. This allows the muffins to rise beautifully without overflowing. For an extra touch, sprinkle the tops with additional shredded coconut, chopped pecans, or rolled oats.
- Bake to Golden Perfection (18-22 minutes): Place the muffin tin(s) into your preheated oven. Bake for 18-22 minutes, or until the tops are golden brown and a wooden skewer inserted into the center of a muffin comes out clean. Remember that muffins will continue to cook slightly from residual heat for a few minutes after they are removed from the oven.
- Cool & Garnish (10 minutes +): Once baked, remove the muffins from the oven and let them cool in the muffin tin for about 5 minutes. This allows them to set before transferring. Carefully remove the muffins from the tin and place them on a wire cooling rack to cool completely. For an extra burst of fresh flavor, sprinkle with fresh orange zest while they are still warm.

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Frequently Asked Questions About Morning Glory Muffins
How do you make muffins exceptionally moist?
The secret to our wonderfully moist Morning Glory Muffins lies in a carefully balanced combination of ingredients. We achieve this perfect texture by incorporating a generous amount of shredded carrots and apples, along with applesauce, orange juice, and a touch of coconut oil. These ingredients work synergistically to infuse and retain moisture, ensuring every bite is tender and delicious without being heavy or greasy.
Can I make these Morning Glory Muffins gluten-free?
While we understand the desire for gluten-free options, we generally do not recommend directly substituting gluten-free flour blends for the white whole wheat flour in this specific recipe. Baking with gluten-free flours often requires precise adjustments to liquid ratios and binders to achieve a comparable texture. This recipe has not been tested with gluten-free alternatives, so results may vary significantly. For best results, we suggest seeking out a dedicated gluten-free morning glory muffin recipe.
What are some creative topping ideas for Morning Glory Muffins?
We love to top our Morning Glory Muffins with a simple sprinkle of rolled oats and fresh orange zest for both visual appeal and a burst of flavor. However, the possibilities for customization are endless! Consider adding a delightful streusel topping for extra crunch and sweetness, a dusting of powdered sugar, a light cream cheese glaze, or a sprinkle of additional chopped nuts like walnuts or almonds. Get creative with your toppings to match your personal taste and presentation desires!
How do I properly store Morning Glory Muffins to keep them fresh?
To keep your Morning Glory Muffins fresh and delicious, ensure they are completely cooled before storing. Once cool, place them in an airtight container. They will stay fresh at room temperature on your countertop for up to 3-4 days. For extended freshness, store them in the refrigerator, where they can last for up to 5-7 days. Always make sure the container is truly airtight to prevent them from drying out.
Can I freeze Morning Glory Muffins for later enjoyment?
Absolutely! Morning Glory Muffins freeze beautifully, making them perfect for meal prep or quick breakfasts. Allow the muffins to cool completely after baking. Then, arrange them in a single layer on a baking sheet and freeze for about an hour until solid. This prevents them from sticking together. Once frozen, transfer them to a freezer-safe bag or airtight container, removing as much air as possible. They can be frozen for up to 3 months. To enjoy, simply thaw them at room temperature or gently warm them in the microwave or oven.

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More of our Favorite…
Delicious & Healthy Muffin Recipes!
If you’ve loved our Morning Glory Muffins, be sure to explore more delightful muffin creations from our collection:
- Healthy Banana Chocolate Chip Muffins: The perfect combination of ripe bananas and sweet chocolate chips, made wholesome.
- Apple Cinnamon Muffins: A timeless classic, bursting with fall flavors and comforting spice.
- Healthy Chocolate Peanut Butter Muffins: A decadent treat for chocolate and peanut butter lovers, crafted with health in mind.
- Almond Flour Lemon Poppy Seed Muffins: Light, bright, and zesty, these muffins offer a refreshing citrus twist.
- Healthy Blueberry Muffins: Fluffy, moist, and packed with juicy blueberries, a wholesome twist on a breakfast staple.
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The Ultimate Morning Glory Muffins Recipe
Linley Hanson
20 minutes
22 minutes
42 minutes
18 muffins
Print Recipe
Ingredients
Dry Ingredients
- 1/2 cup shredded apples, moisture removed
- 1/2 cup shredded carrots, moisture removed
- 1.5 cups white whole wheat flour
- 1/2 cup coconut sugar (or brown sugar)
- 1/4 cup unsweetened shredded coconut, plus more for topping (optional)
- 1/2 cup chopped pecans, plus more for topping (optional)
- 2 tsp ground cinnamon
- 1/4 cup raisins or craisins
- 1 tablespoon flax seed, or ground, if you prefer
- 1 teaspoon ground nutmeg
- 1 teaspoon baking soda
- Fresh orange zest, optional, for topping
- Rolled oats, optional, for topping
Wet Ingredients
- 2 large eggs
- 1/2 cup maple syrup
- 1 cup applesauce (unsweetened)
- 1/2 cup orange juice (freshly squeezed preferred)
- 1 teaspoon vanilla extract
- 3 tablespoons coconut oil, melted
Instructions
- First, preheat your oven to 350°F (175°C). Line a 12-cup muffin tin with muffin liners, and for extra precaution against sticking, lightly spray the liners with cooking spray. If making 18 muffins, prepare a second tin accordingly.
- Next, prepare your fresh ingredients: use a cheese grater or food processor to finely grate both the apple and carrots. The skin can be left on or removed, depending on your preference. We recommend a medium to large grate size to ensure you can still enjoy delightful chunks of apple and carrot in the finished muffins.
- Place the grated apple and carrot onto a double layer of paper towels. Squeeze out as much excess moisture as possible. This is a critical step to prevent your muffins from becoming too dense or soggy.
- In a medium-sized mixing bowl, combine the measured 1/2 cup of shredded apples and 1/2 cup of shredded carrots (with moisture removed) along with all the other dry ingredients listed above (white whole wheat flour, coconut sugar, shredded coconut, chopped pecans, ground cinnamon, raisins, flax seed, ground nutmeg, and baking soda). Mix thoroughly until everything is well combined.
- In a large bowl, crack the 2 large eggs and whisk them until they are lightly beaten. Then, add the maple syrup, applesauce, orange juice, and vanilla extract. Whisk these wet ingredients together until you have a smooth, well-integrated mixture.
- Gently add the combined dry ingredients into the bowl with the wet ingredients. Fold them together using a spatula until they are just combined. Be careful not to overmix; overmixing can result in tough muffins. A few small lumps in the batter are perfectly normal and acceptable.
- Finally, pour in the melted coconut oil and mix it into the batter until it is just incorporated.
- Fill each muffin cup approximately 3/4 of the way full. This will ensure your muffins rise beautifully and achieve a fluffy, domed top without overflowing. Optionally, sprinkle the tops of each muffin with additional shredded coconut, chopped pecans, or rolled oats for extra texture and visual appeal.
- Place the muffin tin(s) into the preheated oven at 350°F (175°C) and bake for 18-22 minutes. The muffins are done when they are golden brown and a wooden skewer inserted into the center comes out clean.
- Allow the muffins to cool in the muffin tin for 5 minutes after removing them from the oven. While still warm, sprinkle them with fresh orange zest for a burst of vibrant citrus flavor.
- After 5 minutes, carefully remove the muffins from the tin and transfer them to a wire cooling rack to cool completely.
Nutrition Facts (per muffin)
Calories: 154 kcal
,
Carbohydrates: 24 g
,
Protein: 3 g
,
Fat: 5 g
,
Fiber: 2 g
,
Sugar: 14 g
Nutrition information is automatically calculated and should only be used as an approximation. It may vary based on specific ingredients and brands used.
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